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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935933.1_cds_XP_016481613.1_72919
CDS Infomation

[gene=LOC107802595] [db_xref=GeneID:107802595] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X2] [protein_id=XP_016481613.1] [location=complement(join(4729..5370,5455..6099))] [gbkey=CDS]
Sequence

ATGCTGATGTCACTAGCTAGTTCAATTTTTTTACAAAATTGGCCATTGTACACAAATTTG
ACCGCCATGATTCGCTTCATCGCCACCACAACCACCGTCATCCACCACCATCTCCGGCAA
CAAATCCGCACCTTCGTCAACGCAAGAATCAAATGGGTACGAGACCCATACCTCGATAAA
GCAGTAGAAAAGGAAAAGAACCTCAAACCATTACTCTCTCTCAAGAACTTAATCCTTTCA
CATCCCTCAAAATCTCTACCCCTTCGCACCATTTCCCCTCTCAAACCCCAACTCAATCTT
CCCACCACTGCTCTCAAATTCATCCAAAATTACCCTTTTGTTTTCAAAACTTTCAGGCCT
CCTGTACCCTTATCCACTCTACATGTAAAGCTCACTCCAAATGCACTATCTTTACATAAT
GATGAGACCCTTTTTCTTAGTCTTTCACATTACCGTAAAGATTTAGCCCAAATATTAGCA
AAGCTATTGATGCTCACAAGAGCTAAAAGACTTCCTTTTTATGTTATTGAAAGGTTTAAA
TTTGACTTGGGTTTGCCTCGTGATTATTTGTTGAGCTTTTTACCTGAATTTCCTGAGTAT
TTTCAGATTTGTCAAATGGGTTTTAAGGATTCTGATGGTCGTGAGGTTTTTGGGTTGGAA
TTAGTTAAATGGAGGGAGGATTTGGCTGTTTCTGTGACGGAGAAAAGGGTGAAAAGAGAG
GATTTTGGGGGTAGGAAAAGAGTGCATATAAGGTTTTCGATGAATTTACCAAGAGGATTT
GATTTGGTGAAGAAAGTGAGGAATTGGGTTGAGGAGTGGCAGAATTTGCCTTACATTTCA
CCTTATGAAGATGCATTTCACTTGGCTCCTAATAGTGATCAAGCAGAGAAATGGACAGTT
GGGGTGATTCATGAACTGTTAAGTTTACTTGTATCAAAGAAGACAGAGAGGGAGAATATT
TATTGCTTAGGGGATTATTTAGGATTTGGAATAAGGTTTAGAAAAGCTTTAGTGCATCAT
CCGGGTATATTTTACTTGTCGAATAAGATTAGGACGCATACTATAGTTTTGAGGGAGGGA
TTTAACAAGAACATACTGGTTGAGAAGCATCCATTGATGAGAATGAGATACAAGTACATC
AGTCTCATGAACAGAGTGTTGAGAAGGGGAATACCAATCAATGCTGGAGCTGTTAGGTAC
AGGAAGCGGCTGACTTCTTCTTTGAAAGGAGGAAAAAGGAAGGAAAATGAGAAGAGGATG
AGACAGGTTAAAAGTCTAGAGACTTGA

Peptide Sequence

PEP ID

XP_016481613.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X2 [Nicotiana tabacum]
Sequence

MLMSLASSIFLQNWPLYTNLTAMIRFIATTTTVIHHHLRQQIRTFVNARIKWVRDPYLDK
AVEKEKNLKPLLSLKNLILSHPSKSLPLRTISPLKPQLNLPTTALKFIQNYPFVFKTFRP
PVPLSTLHVKLTPNALSLHNDETLFLSLSHYRKDLAQILAKLLMLTRAKRLPFYVIERFK
FDLGLPRDYLLSFLPEFPEYFQICQMGFKDSDGREVFGLELVKWREDLAVSVTEKRVKRE
DFGGRKRVHIRFSMNLPRGFDLVKKVRNWVEEWQNLPYISPYEDAFHLAPNSDQAEKWTV
GVIHELLSLLVSKKTERENIYCLGDYLGFGIRFRKALVHHPGIFYLSNKIRTHTIVLREG
FNKNILVEKHPLMRMRYKYISLMNRVLRRGIPINAGAVRYRKRLTSSLKGGKRKENEKRM
RQVKSLET

Transcript Sequence

Gene sequence data has not been registered.